医学影像数据集汇总（持续更新）150个_pmc-oa数据集下载

文章来源：https://zhuanlan.zhihu.com/p/661132213

影像数据集 (150)

全身（5）

TotalSegmentator (3D CT, 1204例, 104类全身器官分割)

TotalSegmentator v2 (3D CT, 1228例, 117类全身器官分割)

CT-ORG (3D CT, 140例, 6类器官分割)

AutoPET (3D PET-CT, 1214例, 1类全身肿瘤分割)

ULS (3D, CT, 38842例, 1类全身肿瘤分割)

头颈部（29）

SegRap 2023 (3D CT, 200 例, 47 类头颈部风险器官分割)

HaN-Seg (3D CT&MRI, 42例, 30类头颈部风险器官分割)

PDDCA (3D CT, 48例, 9类头颈部器官分割)

HECKTOR 2022 (3D PET-CT, 882例, 2类肿瘤和淋巴结分割)

FeTA 2022 (3D MRI, 280例, 7类婴儿脑组织分割)

iSeg (3D MRI, 13例, 3类脑组织分割)

cSeg 2022 (3D MRI, 13例, 3类脑组织分割)

CAS2023 (3D MRI, 100例, 1类脑动脉分割)

BraTS21(3D MRI, 2040例, 3类脑胶质瘤分割)

BraTS2023-SSA (3D MRI, 105例, 3类非洲地区脑胶质瘤分割)

BraTS2023-MET (3D MRI, 328例, 3类脑转移瘤分割)

BraTS2023-MEN (3D MRI, 1650例, 3类脑膜瘤分割)

BraTS2023-PED (3D MRI, 228例, 3类婴儿脑胶质瘤分割)

BraTS-TCGA-LGG (3D MRI, 65例, 3类低级别胶质瘤分割)

BraTS-TCGA-GBM (3D MRI, 102例, 3类多形性胶质母细胞瘤分割)

MSD Hippocampus (3D MRI, 394例, 2类脑海马体分割)

INSTANCE 2022 (3D CT, 200例, 1类脑出血分割)

Head CT-hemorrhage (2D CT, 200例, 2类脑出血分类)

ISLES22 (3D MRI, 400例, 1类中风病变分割)

ATLAS v2.0 (ISLES 2022)(3D MRI, 1271例, 1类中风病灶分割)

WMH (3D MRI, 170例, 1类脑白质高强度信号分割)

L2R-OASIS (3D MRI, 416例, 35类大脑分割和配准)

CrossMoDA 2023 (3D MRI, 983例, 3类前庭神经瘤和耳蜗分割)

ToothFairy (3D CBCT, 443例, 1类下颌神经分割)

Teeth3DS (3D IOS, 1800例, 32类牙齿分割)

TN-SCUI2020 (2D 超声, 4554例, 1类甲状腺结节分割)

Ultrasound Nerve Segmentation (2D 超声, 11143例, 1类颈部神经分割)

DDTI (2D 超声, 637例, 1类甲状腺结节分割)

TG3K (2D 超声, 3585例, 1类甲状腺结节分割)

TN3K (2D 超声, 3494例, 1类甲状腺结节分割)

胸部（23）

ATM22 (3D CT, 500例, 1类肺气管分割)

AIIB23 (3D CT, 312例, 1类肺气管分割)

Parse 2022 (3D CT, 200例, 1类肺动脉分割)

SEG.A. (3D CTA, 56例, 1类主动脉树分割)

SegTHOR (3D CT, 60例, 4类胸部风险器官分割)

FUMPE (3D CT, 35例, 1类肺栓塞分割)

TDSC-ABUS2023 (3D 超声, 200例, 1类乳腺肿瘤分类分割检测)

LNDb (3D CT, 294例, 1类肺结节分割)

LNQ 2023 (3D CT, 513例, 1类胸部纵隔淋巴结分割)

MSD Lung Tumours (3D CT, 96例, 1类肺肿瘤分割)

PleThora (3D CT, 402例, 2 类胸膜积液和胸腔分割)

BUSI (3D 超声, 780例, 3类乳腺肿瘤分类, 1类乳腺肿瘤分割)

MVSeg-3DTEE 2023 (3D 超声, 175例, 2类二尖瓣分割)

Breast Ultrasound Dataset B (2D 超声, 163例, 1类乳腺病变分割)

胸部 X 线成像（肺炎） (2D X-ray, 5856例, 2类肺炎分类)

COVID-19 CHEST X-RAY DATABASE (2D X-ray, 3886例, 3类肺炎分类)

Chest X-ray PD Dataset (2D X-Ray, 4575例, 3类肺炎分类)

COVIDGR (2D X-Ray, 852例, 2类肺炎分类)

Shenzhen chest X-ray set (2D X-Ray, 662例, 2类肺结核分类)

COVID_CT_COVID-CT (2D CT, 746例, 2类肺炎分类)

COVID-19-CT SCAN IMAGES (2D CT, 1400例, 2类肺炎分类)

Chest CT-Scan images (2D CT, 1000例, 4类肺癌分类)

SARS-COV-2 Ct-Scan (2D CT, 2482例, 2类肺炎分类)

腹部（26）

FLARE 2023 (3D CT, 4500例, 14类腹部器官和肿瘤分割)

FLARE 2022 (3D CT, 2300例, 13类腹部器官分割)

FLARE 2021 (3D CT, 511例, 4类腹部器官分割)

AMOS 2022 (3D CT&MRI, 600例, 15类腹部器官分割)

WORD (3D CT, 150例, 16类腹部器官分割)

AbdomenCT-1K (3D CT, 1112例, 4类腹部器官分割)

BTCV (3D CT, 50例, 13类腹部器官分割)

BTCV Cervix (3D CT, 50例, 4类腹部器官分割)

LiTS (3D CT, 201例, 2类肝脏和肝脏肿瘤分割)

KiTS23 (3D CT, 599例, 3类肾脏和肾脏肿瘤分割)

KiTS21 (3D CT, 400例, 3类肾脏和肾脏肿瘤分割)

KiTS19 (3D CT, 300例, 2类肾脏和肾脏肿瘤分割)

KiPA22 (3D CTA, 130例, 4类肾脏，血管和肿瘤分割)

CHAOS (3D CT&MRI, 40例, 4类腹部器官分割)

SPPIN (3D MRI, 111例, 1类神经母细胞瘤分割)

ATLAS (MICCAI2023) (3D CE-MRI, 90例, 2类肝脏和肝脏肿瘤分割)

3D-IRCADB (3D CT, 22例, 40类腹部器官和肿瘤分割)

MSD Pancreas Tumour (3D CT, 420例, 2类胰腺和胰腺肿瘤分割)

MSD Hepatic Vessel (3D CT, 443例, 2类肝脏血管和肝脏肿瘤分割)

MSD Spleen (3D CT, 61例, 1类脾脏分割)

MSD Colon Cancer (3D CT, 190例, 1类结肠肿瘤分割)

MSD Prostate (3D MR, 48例, 2类前列腺分割)

PI-CAI (3D MR, 1500例, 1类前列腺癌分割)

MOOD2023 (3D, CT&MR, 1300例)

LLD-MMRI2023 (3D, MRI, 394例, 肝脏病变检测)

UW-Madison GI Tract Image Segmentation (2D, MRI, 38496例, 3类胃肠道分割)

心脏（6）

LAScarQS 2022 (3D MRI, 194例, 2类左心房和左心房疤痕分割)

MyoPS 2020 (3D MRI, 45例, 5类疤痕、水肿、正常心肌以及左右心室血池分割)

MM-WHS (3D CT/MRI, 120例, 7类心脏亚结构分割)

ACDC (3D MRI, 150例, 3类左右心室和心肌分割)

MSD Cardiac (3D MRI, 30例, 1类左心房分割)

CMRxMotion (3D MRI, 360例, 3类左右心室和心肌分割)

骨头（4）

VerSe (3D CT, 374例, 26类脊椎分割)

SPIDER (3D MR, 544例, 19类脊椎，椎间盘，脊柱管分割)

CTSpine1K (3D CT, 1005例, 25类脊椎分割)

CTPelvic1K (3D CT, 1184例, 4类腰椎、骶骨、左髋和右髋分割)

内窥镜（17）

Kvasir-SEG (2D, Endoscopy, 1160例, 1类结肠息肉分割)

Kvasir-Capsule (2D, Endoscopy, 4741504例, 14类消化道病变分割)

CVC-ClinicDB (2D, Endoscopy, 612例, 1类结肠息肉分割)

EndoMapper (2D, Endoscopy Video, 59例, 三维重建和VSLAM)

EndoSLAM (2D, Endoscopy, 64577例, 三维重建)

m2caiseg (2D, Endoscopy, 307例, 19类腹腔器官和手术器材分割)

EAD 2019 (2D, Endoscopy, 2991例, 7类食管, 结肠,胃, 膀胱, 肝脏分割)

LDPolypVideo (2D, Endoscopy, 861400帧, 1类息肉检测)

LIMUC (2D, Endoscopy, 11276, 4类胃肠梅奥内窥镜评分分类)

SUN Colonoscopy Video (2D, Endoscopy, 158,690例, 1类息肉分割)

Colonoscopic (2D, Endoscopy, 152例, 3类胃肠病变分类)

Sinus Surgery Endoscopic Image Datasets (2D 鼻腔镜, 9003例, 1类手术器械分割)

The Nerthus Dataset (2D 内窥镜, 5525例, 4类肠道清洁等级分类)

CholecT45 Dataset (2D 内窥镜, 90489例, 128类胆囊切除手术动作识别)

CholecSeg8k (2D 内窥镜, 8080例, 13类胆囊切除手术语义分割)

FetReg 2021 Task1 (2D 胎儿镜, 2718例, 3类血管，胎儿，手术工具分割)

Endoscopic Bladder Tissue Classification Dataset (2D 内窥镜, 1754例, 4类膀胱镜组织分类)

眼底（18）

ODIR-5K (2D 眼底图像, 5000例, 8类眼科常见病分类)

RFMiD 2.0 (2D 眼底图像, 3200例, 45类眼部疾病分类)

STARE (2D 眼底图像, 20例, 1类眼底血管分割)

DRIVE (2D 眼底图像, 40例, 1类眼底血管分割)

CHASE (2D 眼底图像, 28例, 1类眼底血管分割)

HRF (2D 眼底图像, 45例, 1类眼底血管分割)

IDRID ( (2D 眼底图像, 81例, 5类糖尿病视网膜病变分割)

ORVS (2D 眼底图像, 49例, 1类眼底血管分割)

LES-AV (2D 眼底图像, 22例, 1类眼底血管分割)

PALM19 (2D 眼底图像, 1200例, 1类眼底血管分割)

RITE (2D 眼底图像, 40例, 1类眼底血管分割)

视网膜图像质量评估 (2D, 眼底图像, 216例, 3类图像质量评估)

DRISHTI-GS (2D 眼底图像, 101例, 2类视杯视盘分割)

Retina (2D 眼底图像, 601例, 4类白内障青光眼视网膜病分类)

Eyepacs (2D 眼底图像, 35126例, 5类糖尿病性视网膜病变分级)

OCTA-500 (2D OCT , 500例, 1类眼底血管分割)

ROSE (2D OCT, 229例, 1类眼底血管分割)

Retinal OCT-C8 (2D OCT, 24000例, 8类视网膜疾病)

RETOUCH (3D OCT, 112例, 3类视网膜液体的分割)

皮肤科（6）

ISIC 2017 (2D 皮肤镜图像, 2750例, 1类黑色素瘤分割)

ISIC 2020 (2D 皮肤镜图像，33126例，2类黑色素瘤良恶性分类)

MED-NODE (2D 皮肤镜图像, 170例, 2类黑色素瘤良恶性分类)

PED-UFES-20 (2D 皮肤镜图像, 2298例, 6类皮肤病分类)

PH² (2D 皮肤镜图像, 200例, 1类黑色素瘤分割)

Web-scraped Skin Image (2D 皮肤镜图像, 804例, 6类皮肤病分类)

显微成像（16）

NeurIPS 2022 Cell Seg (2D 显微成像, 3022例, 1类细胞实例分割)

Malignant Lymphoma Classification (2D 病理切片, 374例, 3类恶性淋巴瘤分类)

BioMediTech (2D 细胞成像, 1862例, 4类视网膜细胞分类)

GlaS (2D 病理图像, 165例, 1类结直肠腺体组织分割)

LC25000 (2D 病理图像, 25000例, 5类病理图像分类)

CoNIC2022 (2D 病理图像, 4981例, 7类组织内的细胞核分割)

MoNuSeg (2D 显微图像, 53 例, 1类细胞核分割)

Corneal Nerve Tortuosity (2D 显微成像, 30例, 3类角膜神经扭曲程度分类)

Corneal Nerve (2D 显微成像, 90例, 2类角膜异常分类)

CORN (2D 显微成像，1698例, 1类角膜神经分割)

HuSHeM (2D 显微图像, 216例, 4类精子分类)

疟疾细胞图像 (2D 显微图像, 27558例, 2类疟疾分类)

DigestPath2019 (2D 病理图像, 250例, 1类消化系统病理分割检测)

ICIAR 2018 BACH Task1 (2D 组织学图像, 400例, 4类乳腺癌分类)

ICIAR 2018 BACH Task2 (2D 组织学图像, 30例, 3类乳腺癌分割)

Complete Blood Count (2D 血液涂片, 360例, 3类血液细胞计数)

影像文本数据集 (8)

VQA-RAD (VQA, 3515 例 QA 对)

SLAKE (VQA, 14028 例 QA 对)

PathVQA (VQA, 32799例 QA 对)

ROCOV2 (caption, 80080 例 image-caption 对)

ImageClef-2019-VQA-Med (VQA, 15292 例 QA 对)

RP3D-Caption (caption, 69523 例 image-caption 对)

Montgomery County CXR Set (2D X-Ray, 138例, 2类 CXR 图像异常诊断)

PMC-OA (VQA, 1.6M QA 对)

文本数据集 (12)

MedQA (QA, 61,097 例 QA 对)

MedMCQA (QA, 193,155 例 QA 对)

PubMedQA (QA, 1000 例专家标注 QA 对)

HealthSearchQA (QA, 3173 例 QA 对)

webMedQA (QA, 63,284 例 QA 对)

LiveQA (QA, 634例 QA 对)

CMExam (QA, 68K 例 QA 对)

CMB (QA, 270K 例 QA 对)

MedDialog-CN (QA, 1.1M 例 QA 对)

Chinese Medical Dialogue Dataset (QA, 792K 例 QA 对)

cMedQA v2.0 (QA, 108K 例 QA 对)

Huatuo-26M (QA, 26M 例 QA 对)